BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033E04LP1|AL429749
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1632 1821 0.0
>3x_Contig1632
Length = 13927
Score = 1821 bits (918), Expect = 0.0
Identities = 919/920 (99%)
Strand = Plus / Plus
Query: 1 tggttgaatacggaaaaaccacaggaatgcgcggatctaatctgcgattttgtggaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5798 tggttgaatacggaaaaaccacaggaatgcgcggatctaatctgcgattttgtggaaagg 5857
Query: 61 cacgaggaagcgtaaatacatacatgccacaatcggccaccgctattacccgccttgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5858 cacgaggaagcgtaaatacatacatgccacaatcggccaccgctattacccgccttgctt 5917
Query: 121 cbtaaaatagattttcttctcttttgcttttggtcgaacgtccctttactgtcactgcca 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5918 cctaaaatagattttcttctcttttgcttttggtcgaacgtccctttactgtcactgcca 5977
Query: 181 ccaagaacaaaaagaaacaagaatttaactattaacggaatctattttcgtggtgtttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5978 ccaagaacaaaaagaaacaagaatttaactattaacggaatctattttcgtggtgtttca 6037
Query: 241 gtttcgcattgtgcatgtcttggttgtgcgtcgaccgagacatttctcgcgttaaaaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6038 gtttcgcattgtgcatgtcttggttgtgcgtcgaccgagacatttctcgcgttaaaaccg 6097
Query: 301 cgtagaagcacacaacgaaacgagaaaaactgtatcacgttcgaacccaaaatcgaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6098 cgtagaagcacacaacgaaacgagaaaaactgtatcacgttcgaacccaaaatcgaacca 6157
Query: 361 aactgagtcgagctgaactaaatttcgcgacacaaagaaaaaattaaaagaaaaaaaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6158 aactgagtcgagctgaactaaatttcgcgacacaaagaaaaaattaaaagaaaaaaaatc 6217
Query: 421 aaagcgcgatttccgtccaaggacatggatcgattaggaattgtaagagaaaaaaaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6218 aaagcgcgatttccgtccaaggacatggatcgattaggaattgtaagagaaaaaaaaagt 6277
Query: 481 acttagtaatgatatacgctactctatgtactgtactataggacttagttagctaacttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6278 acttagtaatgatatacgctactctatgtactgtactataggacttagttagctaacttt 6337
Query: 541 tttcttgagataggccatgcaaattcatgagaacgatggaaatagcgtagttgaaagcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6338 tttcttgagataggccatgcaaattcatgagaacgatggaaatagcgtagttgaaagcgg 6397
Query: 601 gagacgagacgacattccaccttagattggggtatgcacatactatcatccatacagaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6398 gagacgagacgacattccaccttagattggggtatgcacatactatcatccatacagaga 6457
Query: 661 gttgattatatcataatcatacacgttatatcgctgttactagcatttaagtgtaaattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6458 gttgattatatcataatcatacacgttatatcgctgttactagcatttaagtgtaaattt 6517
Query: 721 cttttagttaatttctgtatataccactgtttcgatttcgaatcttattgtgtccacttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6518 cttttagttaatttctgtatataccactgtttcgatttcgaatcttattgtgtccacttt 6577
Query: 781 ctgtttccattttttacaatttttttgttcatagtgggaaagagaatgagagcattagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6578 ctgtttccattttttacaatttttttgttcatagtgggaaagagaatgagagcattagaa 6637
Query: 841 aaaaaaaatagcttaagatttggtttagatccttttcagatccttttttaaaaacaacaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6638 aaaaaaaatagcttaagatttggtttagatccttttcagatccttttttaaaaacaacaa 6697
Query: 901 gattcttcggtccagcttcg 920
||||||||||||||||||||
Sbjct: 6698 gattcttcggtccagcttcg 6717
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,335
Number of Sequences: 1807
Number of extensions: 10335
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)